Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.83■□□□□ 0.29
TRAV8-6A0A0B4J262 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV8-6A0A0B4J262 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-6A0A0B4J262 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-6A0A0B4J262 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV8-6A0A0B4J262 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV8-6A0A0B4J262 AL359504.2-201ENST00000605506 1601 ntBASIC16.83■□□□□ 0.28
TRAV8-6A0A0B4J262 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 AC010501.1-201ENST00000606270 1962 ntBASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 ECEL1P2-201ENST00000461596 1295 ntBASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV8-6A0A0B4J262 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 LINC01124-201ENST00000409786 2117 ntBASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-6A0A0B4J262 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 AC097639.1-201ENST00000565519 1891 ntBASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 AL117328.2-201ENST00000624617 1940 ntBASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 SMPD5-203ENST00000639008 1464 ntBASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 DUSP8P5-201ENST00000422884 1815 ntBASIC16.8■□□□□ 0.28
TRAV8-6A0A0B4J262 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 MIR3960-201ENST00000583311 91 ntBASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 AC092296.2-201ENST00000589470 999 ntBASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-6A0A0B4J262 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-6A0A0B4J262 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 AL157400.5-201ENST00000507624 621 ntBASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV8-6A0A0B4J262 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRAV8-6A0A0B4J262 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV8-6A0A0B4J262 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV8-6A0A0B4J262 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV8-6A0A0B4J262 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-6A0A0B4J262 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms