Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV7-1A0A0A6YYK4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AL022069.1-201ENST00000568025 1636 ntBASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV7-1A0A0A6YYK4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-1A0A0A6YYK4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-1A0A0A6YYK4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV7-1A0A0A6YYK4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV7-1A0A0A6YYK4 KRT8P33-201ENST00000508125 1423 ntBASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AC103834.1-201ENST00000520383 144 ntBASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 MIR4281-201ENST00000580852 62 ntBASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV7-1A0A0A6YYK4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.89■□□□□ 0.46
TRBV7-1A0A0A6YYK4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV7-1A0A0A6YYK4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AC103724.3-201ENST00000564481 992 ntBASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV7-1A0A0A6YYK4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AL031848.2-201ENST00000607670 837 ntBASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AC004812.2-201ENST00000611079 2094 ntBASIC17.87■□□□□ 0.45
TRBV7-1A0A0A6YYK4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-1A0A0A6YYK4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV7-1A0A0A6YYK4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV7-1A0A0A6YYK4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.85■□□□□ 0.45
TRBV7-1A0A0A6YYK4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms