Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AC104794.3-201ENST00000566840 1248 ntBASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.2■□□□□ 0.5
CYP46A1Q9Y6A2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 BASP1P1-201ENST00000430708 665 ntBASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 RARRES2P5-201ENST00000564013 466 ntBASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 AC036164.1-201ENST00000570544 333 ntBASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CYP46A1Q9Y6A2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AC007787.1-201ENST00000588095 1583 ntBASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 FAM86LP-201ENST00000478302 853 ntBASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AC093214.1-201ENST00000511688 1107 ntBASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 AC004790.1-201ENST00000612686 536 ntBASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CYP46A1Q9Y6A2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms