Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 FAM86HP-204ENST00000513466 959 ntBASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 AC107373.2-201ENST00000607735 490 ntBASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 AL607033.1-201ENST00000623900 1599 ntBASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGA9Q9Y5G4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AL022328.3-201ENST00000607943 679 ntBASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms