Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AC074338.1-201ENST00000416825 156 ntBASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TEX28P1-201ENST00000613479 1221 ntBASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TEX28P2-201ENST00000617764 1221 ntBASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RHBDD3Q9Y3P4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC107890.1-201ENST00000422478 521 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC069120.2-201ENST00000524091 540 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC051619.7-201ENST00000568314 623 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms