Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.55■□□□□ 0.24
SSX2IPQ9Y2D8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSX2IPQ9Y2D8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSX2IPQ9Y2D8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 AC026954.1-201ENST00000429771 1293 ntBASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 GAPDHP40-201ENST00000505218 1006 ntBASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 RN7SL560P-201ENST00000577943 264 ntBASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 GNRHR2-203ENST00000581100 1187 ntBASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSX2IPQ9Y2D8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 AL138799.1-201ENST00000448213 1675 ntBASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 NUS1P3-201ENST00000423502 862 ntBASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSX2IPQ9Y2D8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 AC006001.1-201ENST00000325130 474 ntBASIC16.52■□□□□ 0.24
SSX2IPQ9Y2D8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms