Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 TSPY26P-202ENST00000565928 3884 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 BAATP1-201ENST00000412284 1225 ntBASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 AC012441.1-201ENST00000446669 685 ntBASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PTP4A1P2-201ENST00000546033 454 ntBASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 AC012645.4-201ENST00000610691 1061 ntBASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 AC011270.2-201ENST00000624293 2550 ntBASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHA4Q9UN74 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 KRT8P35-201ENST00000483942 1338 ntBASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 AC134312.5-201ENST00000568031 1313 ntBASIC17.46■□□□□ 0.38
PCDHA4Q9UN74 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 AJ011931.1-201ENST00000618749 2492 ntBASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 AC068587.3-201ENST00000526613 355 ntBASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 DUX4L47-201ENST00000566374 394 ntBASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA4Q9UN74 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms