Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDH20Q9HBT6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 SSR4P1-203ENST00000599569 2260 ntBASIC13.46□□□□□ -0.25
CDH20Q9HBT6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 API5-211ENST00000534695 560 ntTSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 CHCHD2P3-201ENST00000603038 451 ntBASIC13.46□□□□□ -0.25
CDH20Q9HBT6 AC008494.3-201ENST00000606615 944 ntBASIC13.46□□□□□ -0.25
CDH20Q9HBT6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDH20Q9HBT6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.46□□□□□ -0.26
CDH20Q9HBT6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AC134915.1-201ENST00000426461 574 ntBASIC13.45□□□□□ -0.26
CDH20Q9HBT6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 VDAC1P7-201ENST00000462417 847 ntBASIC13.45□□□□□ -0.26
CDH20Q9HBT6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AL662799.1-202ENST00000614205 422 ntBASIC13.45□□□□□ -0.26
CDH20Q9HBT6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms