Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FO538757.1-201ENST00000623083 1397 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.74□□□□□ -0.05
PIF1Q9H611 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 AC084364.1-201ENST00000551967 1556 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 REXO1L2P-201ENST00000425429 2069 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 AC018529.2-202ENST00000611482 3087 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PIF1Q9H611 EEF1DP4-201ENST00000446006 880 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 SPDYE11-202ENST00000450699 704 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 RN7SL589P-201ENST00000481268 310 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 IGHV3-62-201ENST00000520057 340 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.74□□□□□ -0.05
PIF1Q9H611 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 AC005829.1-201ENST00000570002 483 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 SPDYE9P-201ENST00000570642 692 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 MIR3687-2-201ENST00000577708 61 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.74□□□□□ -0.05
PIF1Q9H611 SPDYE10P-202ENST00000612005 668 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 SPDYE8P-202ENST00000612377 668 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 MIR3687-1-201ENST00000614492 61 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 UXT-AS1-201ENST00000590504 1525 ntBASIC14.74□□□□□ -0.05
PIF1Q9H611 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 AP3S2-216ENST00000617003 1561 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
PIF1Q9H611 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 MIR346-201ENST00000362234 95 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PIF1Q9H611 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.73□□□□□ -0.05
PIF1Q9H611 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 BX842568.4-201ENST00000421222 227 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.73□□□□□ -0.05
PIF1Q9H611 AC079140.1-201ENST00000508039 487 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 YBX1P5-201ENST00000509441 847 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 AC026979.3-201ENST00000607315 403 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PIF1Q9H611 AC092902.6-201ENST00000641783 218 ntBASIC14.73□□□□□ -0.05
PIF1Q9H611 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PIF1Q9H611 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.73□□□□□ -0.05
PIF1Q9H611 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms