Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 FAM58CP-201ENST00000435741 640 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SPDYE11-202ENST00000450699 704 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 IGHV3-62-201ENST00000520057 340 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SPDYE9P-201ENST00000570642 692 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AC015910.1-201ENST00000579400 975 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SPDYE10P-202ENST00000612005 668 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SPDYE8P-202ENST00000612377 668 ntBASIC14.97□□□□□ -0.01
EBF4Q9BQW3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.97□□□□□ -0.01
EBF4Q9BQW3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC104457.1-201ENST00000401024 814 ntBASIC14.96□□□□□ -0.01
EBF4Q9BQW3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 FO393414.2-201ENST00000405153 598 ntBASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 KRT8P23-201ENST00000560090 1207 ntBASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 AC026120.1-201ENST00000611536 926 ntBASIC14.96□□□□□ -0.01
EBF4Q9BQW3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
EBF4Q9BQW3 UXT-AS1-201ENST00000590504 1525 ntBASIC14.96□□□□□ -0.02
EBF4Q9BQW3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
EBF4Q9BQW3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.95□□□□□ -0.02
EBF4Q9BQW3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EBF4Q9BQW3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms