Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN18Q99952 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTPN18Q99952 RPL18AP3-201ENST00000462885 528 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN18Q99952 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 MIR4522-201ENST00000584932 87 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 SIGLEC18P-201ENST00000602271 909 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 LINC01783-202ENST00000614408 828 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 BX284668.2-205ENST00000619677 828 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 PCDH8P1-201ENST00000428983 2773 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN18Q99952 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 FRMPD2B-201ENST00000431305 1347 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 AL139384.1-201ENST00000612143 3047 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN18Q99952 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN18Q99952 AC018463.1-201ENST00000456674 917 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 AL157792.1-201ENST00000488281 530 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 AC010234.1-201ENST00000494599 870 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN18Q99952 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN18Q99952 CYP4F23P-201ENST00000593402 1579 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 AC144522.1-201ENST00000625111 1658 ntBASIC17.23■□□□□ 0.35
PTPN18Q99952 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN18Q99952 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN18Q99952 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PTPN18Q99952 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN18Q99952 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 CICP11-201ENST00000434745 2827 ntBASIC17.22■□□□□ 0.35
PTPN18Q99952 LINC01165-201ENST00000445190 1623 ntBASIC17.22■□□□□ 0.35
PTPN18Q99952 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN18Q99952 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTPN18Q99952 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN18Q99952 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN18Q99952 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN18Q99952 AL157407.1-201ENST00000435784 904 ntBASIC17.22■□□□□ 0.35
PTPN18Q99952 AP000358.1-201ENST00000456260 156 ntBASIC17.22■□□□□ 0.35
PTPN18Q99952 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN18Q99952 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PTPN18Q99952 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN18Q99952 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms