Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 MTHFR-217ENST00000641820 1569 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAD9AQ99638 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAD9AQ99638 RPSAP31-201ENST00000416648 895 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 HLA-J-204ENST00000495278 958 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.19■□□□□ 0.18
RAD9AQ99638 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAD9AQ99638 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AL805961.1-201ENST00000642026 753 ntBASIC16.19■□□□□ 0.18
RAD9AQ99638 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAD9AQ99638 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.19■□□□□ 0.18
RAD9AQ99638 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAD9AQ99638 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAD9AQ99638 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.18■□□□□ 0.18
RAD9AQ99638 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.18■□□□□ 0.18
RAD9AQ99638 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.18■□□□□ 0.18
RAD9AQ99638 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 AC012441.2-201ENST00000444843 739 ntBASIC16.18■□□□□ 0.18
RAD9AQ99638 AC073150.1-201ENST00000450406 1084 ntBASIC16.18■□□□□ 0.18
RAD9AQ99638 RN7SL8P-201ENST00000461771 266 ntBASIC16.18■□□□□ 0.18
RAD9AQ99638 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.18■□□□□ 0.18
RAD9AQ99638 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.18■□□□□ 0.18
RAD9AQ99638 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 AC087045.2-201ENST00000606279 1003 ntBASIC16.18■□□□□ 0.18
RAD9AQ99638 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.18■□□□□ 0.18
RAD9AQ99638 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
RAD9AQ99638 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAD9AQ99638 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms