Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC004066.1-201ENST00000502488 802 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.86□□□□□ -0.35
CCL13Q99616 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL13Q99616 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL13Q99616 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 CU634019.7-201ENST00000624153 1185 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 FP236241.2-201ENST00000624906 1185 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL13Q99616 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 AC091951.1-201ENST00000512854 2465 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 AC104640.1-201ENST00000562617 2109 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 AC006486.2-201ENST00000624246 2199 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
CCL13Q99616 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL13Q99616 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL13Q99616 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL13Q99616 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.85□□□□□ -0.35
CCL13Q99616 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 AL596325.1-201ENST00000563991 1082 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 SAMD11P1-201ENST00000571429 661 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 AL358472.5-202ENST00000641448 1267 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 AL645728.2-202ENST00000641679 227 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 AC105233.6-201ENST00000642093 218 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL13Q99616 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL13Q99616 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL13Q99616 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.85□□□□□ -0.35
CCL13Q99616 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 AL359258.3-201ENST00000622910 2331 ntBASIC12.84□□□□□ -0.35
CCL13Q99616 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms