Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 PHKG1P2-201ENST00000457537 863 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 CHMP4BP1-201ENST00000556017 588 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 MIR4706-201ENST00000582134 82 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 AC107373.2-201ENST00000607735 490 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 AL096828.3-201ENST00000615354 462 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 AC145423.3-201ENST00000615987 467 ntBASIC17.94■□□□□ 0.46
TRIM47Q96LD4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM47Q96LD4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 KRT18P43-201ENST00000469825 1281 ntBASIC17.93■□□□□ 0.46
TRIM47Q96LD4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 EEF1DP1-201ENST00000585891 896 ntBASIC17.93■□□□□ 0.46
TRIM47Q96LD4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 AC015818.8-201ENST00000587907 1519 ntBASIC17.93■□□□□ 0.46
TRIM47Q96LD4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM47Q96LD4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.92■□□□□ 0.46
TRIM47Q96LD4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 AL590640.2-201ENST00000457038 527 ntBASIC17.92■□□□□ 0.46
TRIM47Q96LD4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 HNRNPUP1-201ENST00000554987 333 ntBASIC17.92■□□□□ 0.46
TRIM47Q96LD4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 KRT8P19-201ENST00000551916 1455 ntBASIC17.92■□□□□ 0.46
TRIM47Q96LD4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 AC092384.3-202ENST00000564646 2873 ntBASIC17.92■□□□□ 0.46
TRIM47Q96LD4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM47Q96LD4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM47Q96LD4 AC068587.6-202ENST00000641839 5619 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms