Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 RPL18AP3-201ENST00000462885 528 ntBASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 AC008825.2-201ENST00000603374 718 ntBASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRIM43Q96BQ3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 MIR6720-201ENST00000611664 98 ntBASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 LINC01783-202ENST00000614408 828 ntBASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 BX284668.2-205ENST00000619677 828 ntBASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 FRMPD2B-201ENST00000431305 1347 ntBASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM43Q96BQ3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms