Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 PRKXP1-201ENST00000561423 1122 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.7■□□□□ 0.58
RPGRQ92834 AC005324.6-201ENST00000587972 613 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 AC090164.2-201ENST00000611487 516 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPGRQ92834 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.7■□□□□ 0.58
RPGRQ92834 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPGRQ92834 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPGRQ92834 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.7■□□□□ 0.58
RPGRQ92834 AC010491.1-201ENST00000563101 2797 ntBASIC18.7■□□□□ 0.58
RPGRQ92834 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPGRQ92834 AL157791.1-201ENST00000553667 1699 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPGRQ92834 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.69■□□□□ 0.58
RPGRQ92834 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.69■□□□□ 0.58
RPGRQ92834 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.69■□□□□ 0.58
RPGRQ92834 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.69■□□□□ 0.58
RPGRQ92834 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.69■□□□□ 0.58
RPGRQ92834 AC125604.1-201ENST00000496255 707 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.69■□□□□ 0.58
RPGRQ92834 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.69■□□□□ 0.58
RPGRQ92834 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 MIR4783-201ENST00000580343 82 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 MIR5572-201ENST00000583188 137 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 AC009955.4-201ENST00000597192 544 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.69■□□□□ 0.58
RPGRQ92834 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 CICP13-201ENST00000422015 2789 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RPGRQ92834 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
RPGRQ92834 SHC1P1-201ENST00000425230 1745 ntBASIC18.69■□□□□ 0.58
RPGRQ92834 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPGRQ92834 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RPGRQ92834 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.68■□□□□ 0.58
RPGRQ92834 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.68■□□□□ 0.58
RPGRQ92834 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.68■□□□□ 0.58
RPGRQ92834 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RPGRQ92834 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.68■□□□□ 0.58
RPGRQ92834 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.68■□□□□ 0.58
RPGRQ92834 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 AC009090.5-201ENST00000624886 2285 ntBASIC18.68■□□□□ 0.58
RPGRQ92834 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.68■□□□□ 0.58
RPGRQ92834 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPGRQ92834 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RPGRQ92834 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPGRQ92834 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
RPGRQ92834 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms