Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
DDX1Q92499 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.29■□□□□ 0.2
DDX1Q92499 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.29■□□□□ 0.2
DDX1Q92499 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.29■□□□□ 0.2
DDX1Q92499 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.29■□□□□ 0.2
DDX1Q92499 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.29■□□□□ 0.2
DDX1Q92499 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 AC055876.2-201ENST00000531834 546 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.29■□□□□ 0.2
DDX1Q92499 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.29■□□□□ 0.2
DDX1Q92499 AL512343.1-201ENST00000605837 169 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 MIR6787-201ENST00000616675 61 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.29■□□□□ 0.2
DDX1Q92499 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DDX1Q92499 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DDX1Q92499 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 FAM45BP-202ENST00000592932 1624 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 AL158070.2-201ENST00000623713 1621 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 REXO1L6P-201ENST00000603433 1515 ntBASIC16.29■□□□□ 0.2
DDX1Q92499 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
DDX1Q92499 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DDX1Q92499 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 LINC00552-201ENST00000625151 2579 ntBASIC16.28■□□□□ 0.2
DDX1Q92499 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DDX1Q92499 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 AC092552.1-201ENST00000547243 906 ntBASIC16.28■□□□□ 0.2
DDX1Q92499 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.28■□□□□ 0.2
DDX1Q92499 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.28■□□□□ 0.2
DDX1Q92499 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 REXO1L5P-201ENST00000622260 2098 ntBASIC16.28■□□□□ 0.2
DDX1Q92499 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DDX1Q92499 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.28■□□□□ 0.2
DDX1Q92499 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
DDX1Q92499 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DDX1Q92499 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.27■□□□□ 0.2
DDX1Q92499 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.27■□□□□ 0.2
DDX1Q92499 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.27■□□□□ 0.2
DDX1Q92499 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms