Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP1Q8TDR0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 AC004461.2-201ENST00000629517 803 ntBASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP1Q8TDR0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 ST20-AS1-201ENST00000560255 4223 ntBASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC00528-201ENST00000600723 2160 ntBASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms