Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.34■□□□□ 0.21
LMO3Q8TAP4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LMO3Q8TAP4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 AC093433.1-201ENST00000458048 571 ntBASIC16.33■□□□□ 0.2
LMO3Q8TAP4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 AC026434.2-201ENST00000506094 1078 ntBASIC16.33■□□□□ 0.2
LMO3Q8TAP4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 MSTO2P-201ENST00000314835 1709 ntBASIC16.33■□□□□ 0.2
LMO3Q8TAP4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.33■□□□□ 0.2
LMO3Q8TAP4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ACTBP8-201ENST00000403258 1108 ntBASIC16.32■□□□□ 0.2
LMO3Q8TAP4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 AC022137.2-201ENST00000503482 481 ntBASIC16.32■□□□□ 0.2
LMO3Q8TAP4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 AP001063.1-201ENST00000568332 529 ntBASIC16.32■□□□□ 0.2
LMO3Q8TAP4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 CU634019.7-201ENST00000624153 1185 ntBASIC16.32■□□□□ 0.2
LMO3Q8TAP4 FP236241.2-201ENST00000624906 1185 ntBASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMO3Q8TAP4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms