Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH19Q8TAB3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 CICP14-201ENST00000629111 2732 ntBASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AC098850.1-201ENST00000419919 790 ntBASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AL596325.1-201ENST00000563991 1082 ntBASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 LILRP1-201ENST00000444199 1370 ntBASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 AC007541.1-201ENST00000570282 1469 ntBASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH19Q8TAB3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH19Q8TAB3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms