Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COMMD1Q8N668 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 FAM8A3P-201ENST00000427218 844 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 AL353705.2-201ENST00000428243 662 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 SPDYE14P-201ENST00000442619 822 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 RARRES2P9-201ENST00000565168 469 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 AC106028.4-201ENST00000614509 607 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 MIR6080-201ENST00000617359 66 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 TCAF1P1-201ENST00000414990 2232 ntBASIC12.84□□□□□ -0.35
COMMD1Q8N668 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.84□□□□□ -0.35
COMMD1Q8N668 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COMMD1Q8N668 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COMMD1Q8N668 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
COMMD1Q8N668 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
COMMD1Q8N668 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
COMMD1Q8N668 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COMMD1Q8N668 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms