Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC016700.1-201ENST00000429424 312 ntBASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 MAGEA5-201ENST00000446757 942 ntBASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 CU633904.3-201ENST00000624042 1029 ntBASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 AC007787.1-201ENST00000588095 1583 ntBASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AL596257.1-201ENST00000641463 2694 ntBASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AL133466.1-201ENST00000447582 150 ntBASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PPY2P-201ENST00000582808 702 ntBASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 AC091812.3-201ENST00000621362 345 ntBASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SYNPOQ8N3V7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SYNPOQ8N3V7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AP005117.1-202ENST00000581724 1908 ntBASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 LINC00554-201ENST00000564841 3011 ntBASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AL023803.2-201ENST00000620080 638 ntBASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AC112504.1-201ENST00000623415 1841 ntBASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SYNPOQ8N3V7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms