Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNE4Q8N205 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNE4Q8N205 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SYNE4Q8N205 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNE4Q8N205 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNE4Q8N205 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 AC136621.1-201ENST00000624017 2304 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 AC011840.2-201ENST00000563063 1520 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 RN7SKP175-201ENST00000408472 289 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 AC104073.2-201ENST00000453737 312 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 RN7SL774P-201ENST00000577467 290 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 AL603764.1-201ENST00000636452 321 ntBASIC18.86■□□□□ 0.61
SYNE4Q8N205 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SYNE4Q8N205 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNE4Q8N205 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 AP000845.1-201ENST00000581677 2131 ntBASIC18.85■□□□□ 0.61
SYNE4Q8N205 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 DPM3-202ENST00000368399 517 ntBASIC18.85■□□□□ 0.61
SYNE4Q8N205 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.85■□□□□ 0.61
SYNE4Q8N205 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SYNE4Q8N205 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNE4Q8N205 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC112693.3-201ENST00000624819 1983 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC020658.6-201ENST00000623564 1870 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 RN7SKP230-201ENST00000365642 335 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC134698.3-201ENST00000523880 214 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms