Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 AC105250.1-201ENST00000509378 2057 ntBASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 AC090502.4-201ENST00000551714 1386 ntBASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 AC090857.1-201ENST00000527400 390 ntBASIC10.41□□□□□ -0.74
CSMD3Q7Z407 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.41□□□□□ -0.74
CSMD3Q7Z407 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 UROS-201ENST00000368774 744 ntTSL 2 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 RPL7P35-201ENST00000446943 740 ntBASIC10.4□□□□□ -0.74
CSMD3Q7Z407 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 NEU3-207ENST00000534628 746 ntTSL 2 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.4□□□□□ -0.74
CSMD3Q7Z407 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 AL135901.1-201ENST00000451812 333 ntBASIC10.4□□□□□ -0.75
CSMD3Q7Z407 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 AC012158.2-201ENST00000536546 354 ntBASIC10.4□□□□□ -0.75
CSMD3Q7Z407 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 AC011247.3-201ENST00000603297 438 ntBASIC10.4□□□□□ -0.75
CSMD3Q7Z407 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CSMD3Q7Z407 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CSMD3Q7Z407 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms