Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 KRT8P22-201ENST00000562317 1415 ntBASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.43■□□□□ 0.06
LYSMD3Q7Z3D4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 AC026748.1-201ENST00000624349 3251 ntBASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 COX5BP8-201ENST00000416911 349 ntBASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 SAMD11P1-201ENST00000571429 661 ntBASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD3Q7Z3D4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC104457.1-201ENST00000401024 814 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC004066.1-201ENST00000502488 802 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 CU634019.7-201ENST00000624153 1185 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 FP236241.2-201ENST00000624906 1185 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AL033527.5-201ENST00000641382 801 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 AL359258.3-201ENST00000622910 2331 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.41■□□□□ 0.06
LYSMD3Q7Z3D4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms