Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 NME2P1-201ENST00000426182 414 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 GNAQP1-201ENST00000444815 1067 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ZNF890P-202ENST00000530367 1156 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC044860.1-202ENST00000559481 777 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.26□□□□□ -0.77
SCXQ7RTU7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SCXQ7RTU7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
SCXQ7RTU7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 CU639417.3-201ENST00000624240 1404 ntBASIC10.25□□□□□ -0.77
SCXQ7RTU7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SCXQ7RTU7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.25□□□□□ -0.77
SCXQ7RTU7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms