Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 GHSR-202ENST00000427970 912 ntBASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 AC026150.2-201ENST00000564693 1156 ntBASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 AC004835.2-201ENST00000603762 682 ntBASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMARCD3Q6STE5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 SLED1-202ENST00000512051 380 ntBASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC011467.4-201ENST00000594891 528 ntBASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 MIR6069-201ENST00000620069 79 ntBASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.06□□□□□ -0.16
SMARCD3Q6STE5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms