Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 AL158070.2-201ENST00000623713 1621 ntBASIC17.26■□□□□ 0.35
SHC4Q6S5L8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 BX640514.1-201ENST00000583223 1918 ntBASIC17.26■□□□□ 0.35
SHC4Q6S5L8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 AC005498.2-205ENST00000593218 784 ntBASIC17.26■□□□□ 0.35
SHC4Q6S5L8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 AL138799.1-201ENST00000448213 1675 ntBASIC17.26■□□□□ 0.35
SHC4Q6S5L8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC4Q6S5L8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 INTS4P1-203ENST00000641008 3683 ntBASIC17.25■□□□□ 0.35
SHC4Q6S5L8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 AL137783.1-201ENST00000623494 1896 ntBASIC17.25■□□□□ 0.35
SHC4Q6S5L8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 RN7SL399P-201ENST00000471648 279 ntBASIC17.25■□□□□ 0.35
SHC4Q6S5L8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHC4Q6S5L8 AC023090.2-201ENST00000625182 2110 ntBASIC17.24■□□□□ 0.35
SHC4Q6S5L8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHC4Q6S5L8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms