Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF43Q68DV7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 BOLA2P3-201ENST00000404566 256 ntBASIC16.13■□□□□ 0.17
RNF43Q68DV7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 AC232323.1-201ENST00000540724 2099 ntBASIC16.13■□□□□ 0.17
RNF43Q68DV7 REXO1L5P-201ENST00000622260 2098 ntBASIC16.13■□□□□ 0.17
RNF43Q68DV7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF43Q68DV7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF43Q68DV7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 BCYRN1-201ENST00000418539 200 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 BNIP3P42-201ENST00000454982 569 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 KRT18P43-201ENST00000469825 1281 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 FAM86LP-201ENST00000478302 853 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 AC104989.1-201ENST00000519711 778 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 SNX29P1-201ENST00000548357 1007 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 BNIP3P29-201ENST00000598302 571 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 AC011447.5-201ENST00000616168 564 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 MIR6787-201ENST00000616675 61 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 GPR182-203ENST00000622922 591 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 AC013726.1-201ENST00000563747 2285 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 KRT8P44-201ENST00000441609 1350 ntBASIC16.12■□□□□ 0.17
RNF43Q68DV7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF43Q68DV7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF43Q68DV7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
RNF43Q68DV7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF43Q68DV7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF43Q68DV7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms