Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL035252.4-201ENST00000624174 288 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AL033527.5-201ENST00000641382 801 ntBASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC39BQ5VTQ0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 AC126365.1-201ENST00000578585 1514 ntBASIC16■□□□□ 0.15
TTC39BQ5VTQ0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 C1QBPP1-201ENST00000400117 770 ntBASIC16■□□□□ 0.15
TTC39BQ5VTQ0 AL512384.1-201ENST00000406683 331 ntBASIC16■□□□□ 0.15
TTC39BQ5VTQ0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 AC093813.1-201ENST00000605066 256 ntBASIC16■□□□□ 0.15
TTC39BQ5VTQ0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 KRT8P22-201ENST00000562317 1415 ntBASIC16■□□□□ 0.15
TTC39BQ5VTQ0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TTC39BQ5VTQ0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 INE1-201ENST00000456273 945 ntBASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AGAP7P-201ENST00000582299 2062 ntBASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AGAP14-201ENST00000624701 2060 ntBASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 AC084364.1-201ENST00000551967 1556 ntBASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC39BQ5VTQ0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms