Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ASIC1P78348 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ASIC1P78348 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ASIC1P78348 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
ASIC1P78348 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ASIC1P78348 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.14■□□□□ 0.33
ASIC1P78348 OR2I1P-209ENST00000641730 5365 ntBASIC17.14■□□□□ 0.33
ASIC1P78348 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ASIC1P78348 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.13■□□□□ 0.33
ASIC1P78348 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ASIC1P78348 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ASIC1P78348 FGD5P1-202ENST00000614866 2498 ntBASIC17.13■□□□□ 0.33
ASIC1P78348 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.13■□□□□ 0.33
ASIC1P78348 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ASIC1P78348 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.13■□□□□ 0.33
ASIC1P78348 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.13■□□□□ 0.33
ASIC1P78348 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ASIC1P78348 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ASIC1P78348 OR2I1P-210ENST00000642037 4691 ntBASIC17.13■□□□□ 0.33
ASIC1P78348 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 AC007686.3-201ENST00000619017 3487 ntBASIC17.13■□□□□ 0.33
ASIC1P78348 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.13■□□□□ 0.33
ASIC1P78348 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.13■□□□□ 0.33
ASIC1P78348 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ASIC1P78348 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ASIC1P78348 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ASIC1P78348 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 MIR770-201ENST00000390219 98 ntBASIC17.12■□□□□ 0.33
ASIC1P78348 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.12■□□□□ 0.33
ASIC1P78348 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.12■□□□□ 0.33
ASIC1P78348 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 RN7SL399P-201ENST00000471648 279 ntBASIC17.12■□□□□ 0.33
ASIC1P78348 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.12■□□□□ 0.33
ASIC1P78348 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.12■□□□□ 0.33
ASIC1P78348 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 AL049840.4-201ENST00000602422 811 ntBASIC17.12■□□□□ 0.33
ASIC1P78348 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ASIC1P78348 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ASIC1P78348 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ASIC1P78348 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ASIC1P78348 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ASIC1P78348 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms