Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
EPHA4P54764 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.75□□□□□ -0.05
EPHA4P54764 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
EPHA4P54764 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
EPHA4P54764 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
EPHA4P54764 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
EPHA4P54764 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.75□□□□□ -0.05
EPHA4P54764 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EPHA4P54764 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
EPHA4P54764 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 AL590640.2-201ENST00000457038 527 ntBASIC14.74□□□□□ -0.05
EPHA4P54764 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.74□□□□□ -0.05
EPHA4P54764 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.74□□□□□ -0.05
EPHA4P54764 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.74□□□□□ -0.05
EPHA4P54764 MIR4525-201ENST00000580000 75 ntBASIC14.74□□□□□ -0.05
EPHA4P54764 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 CICP13-201ENST00000422015 2789 ntBASIC14.74□□□□□ -0.05
EPHA4P54764 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
EPHA4P54764 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA4P54764 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
EPHA4P54764 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA4P54764 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
EPHA4P54764 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA4P54764 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA4P54764 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
EPHA4P54764 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 GHSR-202ENST00000427970 912 ntBASIC14.73□□□□□ -0.05
EPHA4P54764 AC245100.3-201ENST00000441281 285 ntBASIC14.73□□□□□ -0.05
EPHA4P54764 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA4P54764 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.73□□□□□ -0.05
EPHA4P54764 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA4P54764 ECM1P1-201ENST00000604092 1279 ntBASIC14.73□□□□□ -0.05
EPHA4P54764 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA4P54764 AC009542.2-202ENST00000619004 1067 ntBASIC14.73□□□□□ -0.05
EPHA4P54764 MIR6869-201ENST00000619434 62 ntBASIC14.73□□□□□ -0.05
EPHA4P54764 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA4P54764 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA4P54764 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA4P54764 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA4P54764 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA4P54764 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms