Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHB4P54760 C2orf27AP3-201ENST00000434123 579 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHB4P54760 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 BX284668.4-201ENST00000453917 508 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
EPHB4P54760 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.27■□□□□ 0.36
EPHB4P54760 AP006547.1-201ENST00000563435 692 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
EPHB4P54760 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.27■□□□□ 0.36
EPHB4P54760 AL354718.3-201ENST00000616414 581 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 CR382287.1-201ENST00000623954 586 ntBASIC17.27■□□□□ 0.36
EPHB4P54760 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EPHB4P54760 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.27■□□□□ 0.35
EPHB4P54760 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB4P54760 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB4P54760 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.27■□□□□ 0.35
EPHB4P54760 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.27■□□□□ 0.35
EPHB4P54760 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHB4P54760 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.27■□□□□ 0.35
EPHB4P54760 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB4P54760 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.27■□□□□ 0.35
EPHB4P54760 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB4P54760 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHB4P54760 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
EPHB4P54760 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
EPHB4P54760 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 AC006001.1-201ENST00000325130 474 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 BTBD6P1-201ENST00000412176 1267 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 NUS1P3-201ENST00000423502 862 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.26■□□□□ 0.35
EPHB4P54760 FAM197Y7-201ENST00000432892 766 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHB4P54760 UPF3AP2-201ENST00000457924 1132 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 SCARNA20.5-201ENST00000516991 142 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 AC078819.1-201ENST00000547454 765 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 AC012085.1-201ENST00000548270 765 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 CHMP4BP1-201ENST00000556017 588 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 AC025279.2-201ENST00000569730 653 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHB4P54760 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.26■□□□□ 0.35
EPHB4P54760 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 NFIC-211ENST00000641145 8399 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 PCGF3-213ENST00000620529 1899 ntBASIC17.26■□□□□ 0.35
EPHB4P54760 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHB4P54760 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHB4P54760 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
EPHB4P54760 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB4P54760 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB4P54760 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHB4P54760 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHB4P54760 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB4P54760 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB4P54760 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHB4P54760 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHB4P54760 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms