Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CX3CR1P49238 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CX3CR1P49238 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CX3CR1P49238 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 FAM86GP-201ENST00000448322 971 ntBASIC13.54□□□□□ -0.24
CX3CR1P49238 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.54□□□□□ -0.24
CX3CR1P49238 SDHAP3-202ENST00000515467 728 ntBASIC13.54□□□□□ -0.24
CX3CR1P49238 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.54□□□□□ -0.24
CX3CR1P49238 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CX3CR1P49238 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
CX3CR1P49238 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CX3CR1P49238 AL121723.1-201ENST00000445194 1519 ntBASIC13.54□□□□□ -0.24
CX3CR1P49238 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CX3CR1P49238 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CX3CR1P49238 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CX3CR1P49238 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 AC015911.4-201ENST00000588022 1070 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 AC025181.2-201ENST00000606994 802 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 AC093028.1-201ENST00000622998 982 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.53□□□□□ -0.24
CX3CR1P49238 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 AJ011931.1-201ENST00000618749 2492 ntBASIC13.53□□□□□ -0.24
CX3CR1P49238 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.53□□□□□ -0.24
CX3CR1P49238 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CX3CR1P49238 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CX3CR1P49238 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.52□□□□□ -0.24
CX3CR1P49238 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms