Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AL135901.1-201ENST00000451812 333 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AC093909.3-201ENST00000504783 336 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AC055811.3-201ENST00000584952 686 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.05■□□□□ 0.32
TM4SF4P48230 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.05■□□□□ 0.32
TM4SF4P48230 AP000322.3-201ENST00000608665 388 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 MTHFR-217ENST00000641820 1569 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF4P48230 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TM4SF4P48230 FZD10-202ENST00000539839 3282 ntBASIC17.05■□□□□ 0.32
TM4SF4P48230 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF4P48230 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.05■□□□□ 0.32
TM4SF4P48230 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TM4SF4P48230 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TM4SF4P48230 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TM4SF4P48230 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM4SF4P48230 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 AHCYP4-201ENST00000419201 1315 ntBASIC17.04■□□□□ 0.32
TM4SF4P48230 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TM4SF4P48230 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 GUSBP10-201ENST00000417412 665 ntBASIC17.04■□□□□ 0.32
TM4SF4P48230 AGGF1P2-201ENST00000426656 2106 ntBASIC17.04■□□□□ 0.32
TM4SF4P48230 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 RPL35P9-201ENST00000446059 350 ntBASIC17.04■□□□□ 0.32
TM4SF4P48230 DUX4L50-201ENST00000455245 715 ntBASIC17.04■□□□□ 0.32
TM4SF4P48230 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TM4SF4P48230 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.04■□□□□ 0.32
TM4SF4P48230 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
TM4SF4P48230 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF4P48230 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A21P-201ENST00000510875 1396 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A15P-201ENST00000514465 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A6P-201ENST00000515148 1394 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A16P-201ENST00000526662 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A9P-201ENST00000527940 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A5P-201ENST00000528738 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A14P-201ENST00000530386 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 FAM90A13P-201ENST00000534703 1395 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 COX20P1-201ENST00000366529 357 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.03■□□□□ 0.32
TM4SF4P48230 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.03■□□□□ 0.32
TM4SF4P48230 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.03■□□□□ 0.32
TM4SF4P48230 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 AC011471.3-201ENST00000623576 402 ntBASIC17.03■□□□□ 0.32
TM4SF4P48230 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF4P48230 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TM4SF4P48230 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms