Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.98■□□□□ 0.47
NEDD4P46934 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NEDD4P46934 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NEDD4P46934 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEDD4P46934 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.98■□□□□ 0.47
NEDD4P46934 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.98■□□□□ 0.47
NEDD4P46934 KRT17P8-201ENST00000540749 863 ntBASIC17.98■□□□□ 0.47
NEDD4P46934 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 DUX4L47-201ENST00000566374 394 ntBASIC17.98■□□□□ 0.47
NEDD4P46934 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.98■□□□□ 0.47
NEDD4P46934 AC004466.1-201ENST00000599515 1080 ntBASIC17.98■□□□□ 0.47
NEDD4P46934 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.98■□□□□ 0.47
NEDD4P46934 AL162274.1-201ENST00000617191 1098 ntBASIC17.98■□□□□ 0.47
NEDD4P46934 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 ANKRD19P-201ENST00000338192 862 ntBASIC17.97■□□□□ 0.47
NEDD4P46934 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.97■□□□□ 0.47
NEDD4P46934 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.97■□□□□ 0.47
NEDD4P46934 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.97■□□□□ 0.47
NEDD4P46934 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 AL022328.1-201ENST00000610050 478 ntBASIC17.97■□□□□ 0.47
NEDD4P46934 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEDD4P46934 LRRC59-203ENST00000576448 1531 ntBASIC17.96■□□□□ 0.47
NEDD4P46934 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 AC055811.4-201ENST00000624039 1754 ntBASIC17.96■□□□□ 0.47
NEDD4P46934 LINC02228-204ENST00000642115 2962 ntBASIC17.96■□□□□ 0.47
NEDD4P46934 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NEDD4P46934 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.96■□□□□ 0.47
NEDD4P46934 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NEDD4P46934 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEDD4P46934 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.96■□□□□ 0.47
NEDD4P46934 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NEDD4P46934 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.96■□□□□ 0.46
NEDD4P46934 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NEDD4P46934 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.96■□□□□ 0.46
NEDD4P46934 AL590640.2-201ENST00000457038 527 ntBASIC17.96■□□□□ 0.46
NEDD4P46934 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.96■□□□□ 0.46
NEDD4P46934 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.96■□□□□ 0.46
NEDD4P46934 AC026434.2-201ENST00000506094 1078 ntBASIC17.96■□□□□ 0.46
NEDD4P46934 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms