Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT9P35527 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
KRT9P35527 MTHFR-210ENST00000641407 2387 ntBASIC16.84■□□□□ 0.29
KRT9P35527 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.83■□□□□ 0.29
KRT9P35527 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
KRT9P35527 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.83■□□□□ 0.29
KRT9P35527 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT9P35527 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT9P35527 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 AL080243.2-201ENST00000418783 582 ntBASIC16.83■□□□□ 0.28
KRT9P35527 FAM86GP-201ENST00000448322 971 ntBASIC16.83■□□□□ 0.28
KRT9P35527 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 AC069120.2-201ENST00000524091 540 ntBASIC16.83■□□□□ 0.28
KRT9P35527 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT9P35527 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT9P35527 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT9P35527 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT9P35527 AC015911.4-201ENST00000588022 1070 ntBASIC16.83■□□□□ 0.28
KRT9P35527 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT9P35527 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT9P35527 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT9P35527 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 AL365209.1-201ENST00000624418 6473 ntBASIC16.82■□□□□ 0.28
KRT9P35527 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 AC097376.2-205ENST00000610159 5334 ntBASIC16.82■□□□□ 0.28
KRT9P35527 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KRT9P35527 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.82■□□□□ 0.28
KRT9P35527 AC107890.1-201ENST00000422478 521 ntBASIC16.82■□□□□ 0.28
KRT9P35527 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.82■□□□□ 0.28
KRT9P35527 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 AC140878.1-201ENST00000565277 250 ntBASIC16.82■□□□□ 0.28
KRT9P35527 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.82■□□□□ 0.28
KRT9P35527 AL033527.5-202ENST00000641632 1098 ntBASIC16.82■□□□□ 0.28
KRT9P35527 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms