Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 AL137783.1-201ENST00000623494 1896 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC6A4P31645 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 AL109954.1-202ENST00000564051 2148 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC006001.1-201ENST00000325130 474 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC6A4P31645 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC6A4P31645 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 RNA5SP486-201ENST00000515961 83 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SLC6A4P31645 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC6A4P31645 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SLC6A4P31645 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC091951.1-201ENST00000512854 2465 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC6A4P31645 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC6A4P31645 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC6A4P31645 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC6A4P31645 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A4P31645 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A4P31645 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A4P31645 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A4P31645 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC6A4P31645 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC6A4P31645 RN7SL48P-201ENST00000579283 293 ntBASIC15.66■□□□□ 0.1
SLC6A4P31645 ENPP7P14-201ENST00000621765 1040 ntBASIC15.66■□□□□ 0.1
SLC6A4P31645 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms