Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 AC022144.1-201ENST00000602255 1580 ntBASIC15.19■□□□□ 0.02
VARSP26640 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
VARSP26640 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 AC100757.3-201ENST00000622361 1406 ntBASIC15.18■□□□□ 0.02
VARSP26640 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.18■□□□□ 0.02
VARSP26640 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 KRT18P64-201ENST00000434946 1219 ntBASIC15.18■□□□□ 0.02
VARSP26640 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.18■□□□□ 0.02
VARSP26640 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.18■□□□□ 0.02
VARSP26640 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.18■□□□□ 0.02
VARSP26640 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 AL844908.2-201ENST00000609461 460 ntBASIC15.18■□□□□ 0.02
VARSP26640 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.18■□□□□ 0.02
VARSP26640 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 CICP23-201ENST00000605013 2741 ntBASIC15.18■□□□□ 0.02
VARSP26640 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.18■□□□□ 0.02
VARSP26640 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VARSP26640 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARSP26640 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 AC126365.1-201ENST00000578585 1514 ntBASIC15.17■□□□□ 0.02
VARSP26640 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
VARSP26640 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 AC041040.2-201ENST00000622926 2899 ntBASIC15.17■□□□□ 0.02
VARSP26640 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
VARSP26640 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VARSP26640 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
VARSP26640 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.17■□□□□ 0.02
VARSP26640 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
VARSP26640 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.17■□□□□ 0.02
VARSP26640 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.17■□□□□ 0.02
VARSP26640 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.17■□□□□ 0.02
VARSP26640 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
VARSP26640 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARSP26640 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
VARSP26640 AL109936.8-201ENST00000641772 604 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms