Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
ATF1P18846 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.52□□□□□ -0.25
ATF1P18846 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 AC092135.3-201ENST00000624151 1846 ntBASIC13.51□□□□□ -0.25
ATF1P18846 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ATF1P18846 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.51□□□□□ -0.25
ATF1P18846 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
ATF1P18846 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
ATF1P18846 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.51□□□□□ -0.25
ATF1P18846 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.51□□□□□ -0.25
ATF1P18846 BANF1P1-201ENST00000553684 263 ntBASIC13.51□□□□□ -0.25
ATF1P18846 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.51□□□□□ -0.25
ATF1P18846 AC003101.2-201ENST00000612557 442 ntBASIC13.51□□□□□ -0.25
ATF1P18846 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ATF1P18846 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ATF1P18846 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATF1P18846 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.5□□□□□ -0.25
ATF1P18846 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.5□□□□□ -0.25
ATF1P18846 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.5□□□□□ -0.25
ATF1P18846 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 SPDYE17-201ENST00000412399 783 ntBASIC13.5□□□□□ -0.25
ATF1P18846 GHSR-202ENST00000427970 912 ntBASIC13.5□□□□□ -0.25
ATF1P18846 FAM58DP-201ENST00000428076 619 ntBASIC13.5□□□□□ -0.25
ATF1P18846 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATF1P18846 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms