Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC2P18074 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC2P18074 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ERCC2P18074 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC2P18074 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC2P18074 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC2P18074 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.77■□□□□ 0.12
ERCC2P18074 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.77■□□□□ 0.12
ERCC2P18074 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 AP001582.1-201ENST00000525856 295 ntBASIC15.77■□□□□ 0.12
ERCC2P18074 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.77■□□□□ 0.12
ERCC2P18074 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC2P18074 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.77■□□□□ 0.12
ERCC2P18074 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ERCC2P18074 BX539320.1-201ENST00000623759 877 ntBASIC15.77■□□□□ 0.12
ERCC2P18074 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ERCC2P18074 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC2P18074 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.77■□□□□ 0.11
ERCC2P18074 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC2P18074 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC2P18074 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC2P18074 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.77■□□□□ 0.11
ERCC2P18074 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC2P18074 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.77■□□□□ 0.11
ERCC2P18074 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ERCC2P18074 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ERCC2P18074 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 AJ011931.1-201ENST00000618749 2492 ntBASIC15.76■□□□□ 0.11
ERCC2P18074 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 REXO1L5P-201ENST00000622260 2098 ntBASIC15.76■□□□□ 0.11
ERCC2P18074 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ERCC2P18074 AL645937.2-201ENST00000396808 931 ntBASIC15.76■□□□□ 0.11
ERCC2P18074 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC2P18074 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.76■□□□□ 0.11
ERCC2P18074 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC2P18074 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC2P18074 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.76■□□□□ 0.11
ERCC2P18074 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ERCC2P18074 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.76■□□□□ 0.11
ERCC2P18074 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ERCC2P18074 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms