Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC26.05■■□□□ 1.76
TOP2AP11388 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TOP2AP11388 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC26.05■■□□□ 1.76
TOP2AP11388 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC26.05■■□□□ 1.76
TOP2AP11388 LINC01783-202ENST00000614408 828 ntBASIC26.05■■□□□ 1.76
TOP2AP11388 BX284668.2-205ENST00000619677 828 ntBASIC26.05■■□□□ 1.76
TOP2AP11388 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
TOP2AP11388 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
TOP2AP11388 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
TOP2AP11388 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC26.05■■□□□ 1.76
TOP2AP11388 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
TOP2AP11388 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC26.04■■□□□ 1.76
TOP2AP11388 RPSAP15-201ENST00000448168 861 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 AC027237.1-201ENST00000560942 655 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 MIR6858-201ENST00000620733 67 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 AC009145.4-201ENST00000625119 1294 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 AHCYP4-201ENST00000419201 1315 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC26.04■■□□□ 1.76
TOP2AP11388 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC26.04■■□□□ 1.76
TOP2AP11388 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TOP2AP11388 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TOP2AP11388 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC26.04■■□□□ 1.76
TOP2AP11388 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC26.04■■□□□ 1.76
TOP2AP11388 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC26.04■■□□□ 1.76
TOP2AP11388 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC26.04■■□□□ 1.76
TOP2AP11388 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TOP2AP11388 AC005041.3-201ENST00000606287 649 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 AC073911.3-201ENST00000624401 631 ntBASIC26.04■■□□□ 1.76
TOP2AP11388 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC26.03■■□□□ 1.76
TOP2AP11388 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 WARS-232ENST00000556645 2508 ntTSL 5 BASIC26.03■■□□□ 1.76
TOP2AP11388 C18orf15-201ENST00000623680 2534 ntBASIC26.03■■□□□ 1.76
TOP2AP11388 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TOP2AP11388 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC26.03■■□□□ 1.76
TOP2AP11388 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC26.03■■□□□ 1.76
TOP2AP11388 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 AC093752.3-201ENST00000567343 901 ntBASIC26.03■■□□□ 1.76
TOP2AP11388 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
TOP2AP11388 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TOP2AP11388 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TOP2AP11388 RNF165-205ENST00000588679 2904 ntBASIC26.02■■□□□ 1.76
TOP2AP11388 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC26.02■■□□□ 1.76
TOP2AP11388 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC26.02■■□□□ 1.76
TOP2AP11388 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC26.02■■□□□ 1.76
TOP2AP11388 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC26.02■■□□□ 1.76
TOP2AP11388 PTK2-225ENST00000520892 571 ntTSL 4 BASIC26.02■■□□□ 1.76
TOP2AP11388 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC26.02■■□□□ 1.76
TOP2AP11388 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC26.02■■□□□ 1.76
TOP2AP11388 MIR6769A-201ENST00000617340 73 ntBASIC26.02■■□□□ 1.76
TOP2AP11388 AC105137.3-201ENST00000617588 984 ntBASIC26.02■■□□□ 1.76
TOP2AP11388 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC26.02■■□□□ 1.76
TOP2AP11388 MVK-217ENST00000639206 367 ntTSL 5 BASIC26.02■■□□□ 1.76
TOP2AP11388 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC26.02■■□□□ 1.76
TOP2AP11388 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TOP2AP11388 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC26.01■■□□□ 1.76
TOP2AP11388 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TOP2AP11388 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TOP2AP11388 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TOP2AP11388 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TOP2AP11388 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC26.01■■□□□ 1.75
TOP2AP11388 HNRNPA1P27-201ENST00000412087 955 ntBASIC26.01■■□□□ 1.75
TOP2AP11388 AL627422.1-201ENST00000434104 580 ntBASIC26.01■■□□□ 1.75
TOP2AP11388 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC26.01■■□□□ 1.75
TOP2AP11388 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC26.01■■□□□ 1.75
TOP2AP11388 AC079112.1-201ENST00000454972 939 ntBASIC26.01■■□□□ 1.75
TOP2AP11388 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC26.01■■□□□ 1.75
TOP2AP11388 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC26.01■■□□□ 1.75
TOP2AP11388 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC26.01■■□□□ 1.75
TOP2AP11388 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms