Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM3P06753 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM3P06753 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM3P06753 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM3P06753 HLA-H-201ENST00000383620 1096 ntBASIC17.27■□□□□ 0.36
TPM3P06753 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.27■□□□□ 0.36
TPM3P06753 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM3P06753 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.27■□□□□ 0.36
TPM3P06753 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.27■□□□□ 0.36
TPM3P06753 HNRNPUP1-201ENST00000554987 333 ntBASIC17.27■□□□□ 0.36
TPM3P06753 AC027307.2-201ENST00000591252 911 ntBASIC17.27■□□□□ 0.36
TPM3P06753 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.27■□□□□ 0.36
TPM3P06753 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TPM3P06753 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TPM3P06753 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM3P06753 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM3P06753 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TPM3P06753 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TPM3P06753 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
TPM3P06753 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM3P06753 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TPM3P06753 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM3P06753 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM3P06753 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM3P06753 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM3P06753 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
TPM3P06753 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TPM3P06753 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM3P06753 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM3P06753 CICP17-201ENST00000418553 2377 ntBASIC17.25■□□□□ 0.35
TPM3P06753 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM3P06753 AC136604.1-201ENST00000418535 575 ntBASIC17.25■□□□□ 0.35
TPM3P06753 AC142381.1-201ENST00000426099 345 ntBASIC17.25■□□□□ 0.35
TPM3P06753 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM3P06753 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.25■□□□□ 0.35
TPM3P06753 AC097359.3-201ENST00000603982 1210 ntBASIC17.25■□□□□ 0.35
TPM3P06753 AC099522.2-201ENST00000607001 744 ntBASIC17.25■□□□□ 0.35
TPM3P06753 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM3P06753 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms