Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.66■□□□□ 0.74
COL5A2P05997 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 CYP2T1P-202ENST00000641596 2535 ntBASIC19.65■□□□□ 0.74
COL5A2P05997 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.65■□□□□ 0.74
COL5A2P05997 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 TMBIM7P-202ENST00000641474 1516 ntBASIC19.65■□□□□ 0.74
COL5A2P05997 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL5A2P05997 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 AL357563.1-201ENST00000404728 395 ntBASIC19.65■□□□□ 0.74
COL5A2P05997 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.65■□□□□ 0.74
COL5A2P05997 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.65■□□□□ 0.74
COL5A2P05997 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.65■□□□□ 0.74
COL5A2P05997 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COL5A2P05997 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.65■□□□□ 0.74
COL5A2P05997 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.65■□□□□ 0.74
COL5A2P05997 AC087392.5-201ENST00000612517 489 ntBASIC19.65■□□□□ 0.74
COL5A2P05997 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.65■□□□□ 0.74
COL5A2P05997 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL5A2P05997 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.65■□□□□ 0.74
COL5A2P05997 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL5A2P05997 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.65■□□□□ 0.74
COL5A2P05997 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.64■□□□□ 0.73
COL5A2P05997 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.64■□□□□ 0.73
COL5A2P05997 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.64■□□□□ 0.73
COL5A2P05997 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.64■□□□□ 0.73
COL5A2P05997 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 AC007326.1-201ENST00000604539 458 ntBASIC19.64■□□□□ 0.73
COL5A2P05997 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.64■□□□□ 0.73
COL5A2P05997 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.64■□□□□ 0.73
COL5A2P05997 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.64■□□□□ 0.73
COL5A2P05997 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.64■□□□□ 0.73
COL5A2P05997 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL5A2P05997 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
COL5A2P05997 AC013726.1-201ENST00000563747 2285 ntBASIC19.63■□□□□ 0.73
COL5A2P05997 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.63■□□□□ 0.73
COL5A2P05997 IL9RP3-201ENST00000442856 1674 ntBASIC19.63■□□□□ 0.73
COL5A2P05997 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 HIST2H2BA-201ENST00000412169 381 ntBASIC19.63■□□□□ 0.73
COL5A2P05997 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.63■□□□□ 0.73
COL5A2P05997 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.63■□□□□ 0.73
COL5A2P05997 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.63■□□□□ 0.73
COL5A2P05997 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.63■□□□□ 0.73
COL5A2P05997 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.63■□□□□ 0.73
COL5A2P05997 AC009560.1-201ENST00000620208 434 ntBASIC19.63■□□□□ 0.73
COL5A2P05997 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.63■□□□□ 0.73
COL5A2P05997 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COL5A2P05997 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
COL5A2P05997 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms