Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.55□□□□□ -0.08
MT-ND1P03886 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.55□□□□□ -0.08
MT-ND1P03886 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 AC243562.1-201ENST00000560672 389 ntBASIC14.55□□□□□ -0.08
MT-ND1P03886 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MT-ND1P03886 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MT-ND1P03886 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MT-ND1P03886 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 AC113367.3-201ENST00000508316 1912 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 MIR346-201ENST00000362234 95 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 AZGP1P1-201ENST00000411909 902 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 MCCD1P2-201ENST00000423228 335 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 SPDYE11-202ENST00000450699 704 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.54□□□□□ -0.08
MT-ND1P03886 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 SPDYE9P-201ENST00000570642 692 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 AC026120.1-201ENST00000611536 926 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 SPDYE10P-202ENST00000612005 668 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 SPDYE8P-202ENST00000612377 668 ntBASIC14.54□□□□□ -0.08
MT-ND1P03886 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MT-ND1P03886 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.54□□□□□ -0.08
MT-ND1P03886 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MT-ND1P03886 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.54□□□□□ -0.08
MT-ND1P03886 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.53□□□□□ -0.08
MT-ND1P03886 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MT-ND1P03886 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.53□□□□□ -0.08
MT-ND1P03886 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms