Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.3□□□□□ -0.44
APOC3P02656 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 AC133681.1-201ENST00000465482 601 ntBASIC12.3□□□□□ -0.44
APOC3P02656 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
APOC3P02656 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 AC233263.1-201ENST00000578059 224 ntBASIC12.3□□□□□ -0.44
APOC3P02656 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.3□□□□□ -0.44
APOC3P02656 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 PTPRVP-205ENST00000641549 5067 ntBASIC12.3□□□□□ -0.44
APOC3P02656 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 AC145098.2-201ENST00000623593 3026 ntBASIC12.29□□□□□ -0.44
APOC3P02656 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
APOC3P02656 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC3P02656 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 AC009947.2-201ENST00000444014 672 ntBASIC12.29□□□□□ -0.44
APOC3P02656 AC245100.5-201ENST00000452108 331 ntBASIC12.29□□□□□ -0.44
APOC3P02656 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC3P02656 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC3P02656 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.29□□□□□ -0.44
APOC3P02656 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.29□□□□□ -0.44
APOC3P02656 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 AP000437.1-201ENST00000624057 2085 ntBASIC12.29□□□□□ -0.44
APOC3P02656 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC3P02656 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 INE2-201ENST00000630399 1874 ntBASIC12.29□□□□□ -0.44
APOC3P02656 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
APOC3P02656 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
APOC3P02656 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
APOC3P02656 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
APOC3P02656 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.28□□□□□ -0.44
APOC3P02656 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms