Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 AL138799.1-201ENST00000448213 1675 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 AC112492.5-201ENST00000421897 457 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 AC093433.1-201ENST00000458048 571 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 KRT17P8-201ENST00000540749 863 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 HILS1-202ENST00000545329 423 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.74■□□□□ 0.11
MT-CO1P00395 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 AL162274.1-201ENST00000617191 1098 ntBASIC15.74■□□□□ 0.11
MT-CO1P00395 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.74■□□□□ 0.11
MT-CO1P00395 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-CO1P00395 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MT-CO1P00395 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-CO1P00395 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-CO1P00395 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-CO1P00395 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
MT-CO1P00395 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 OR8S1-201ENST00000310194 1080 ntBASIC15.73■□□□□ 0.11
MT-CO1P00395 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
MT-CO1P00395 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.73■□□□□ 0.11
MT-CO1P00395 AP001582.1-201ENST00000525856 295 ntBASIC15.73■□□□□ 0.11
MT-CO1P00395 SLC25A47P1-201ENST00000531577 414 ntBASIC15.73■□□□□ 0.11
MT-CO1P00395 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-CO1P00395 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-CO1P00395 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-CO1P00395 AC015936.2-201ENST00000593177 259 ntBASIC15.73■□□□□ 0.11
MT-CO1P00395 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
MT-CO1P00395 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-CO1P00395 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 AC020658.6-201ENST00000623564 1870 ntBASIC15.73■□□□□ 0.11
MT-CO1P00395 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-CO1P00395 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MT-CO1P00395 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-CO1P00395 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-CO1P00395 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-CO1P00395 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms