Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.69□□□□□ -0.22
CNOT4O95628 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 AC127383.1-201ENST00000444697 1800 ntBASIC13.69□□□□□ -0.22
CNOT4O95628 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 C1QBPP1-201ENST00000400117 770 ntBASIC13.69□□□□□ -0.22
CNOT4O95628 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.69□□□□□ -0.22
CNOT4O95628 GAPDHP40-201ENST00000505218 1006 ntBASIC13.69□□□□□ -0.22
CNOT4O95628 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 AC124283.3-201ENST00000570869 594 ntBASIC13.69□□□□□ -0.22
CNOT4O95628 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.69□□□□□ -0.22
CNOT4O95628 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CNOT4O95628 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNOT4O95628 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CNOT4O95628 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CNOT4O95628 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 ACKR1-201ENST00000368121 1240 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.68□□□□□ -0.22
CNOT4O95628 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms