Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMPCBO75439 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMPCBO75439 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.62■□□□□ 0.09
PMPCBO75439 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMPCBO75439 WASH3P-207ENST00000560956 1394 ntBASIC15.62■□□□□ 0.09
PMPCBO75439 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.61■□□□□ 0.09
PMPCBO75439 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.61■□□□□ 0.09
PMPCBO75439 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.61■□□□□ 0.09
PMPCBO75439 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PMPCBO75439 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.61■□□□□ 0.09
PMPCBO75439 AC002472.2-201ENST00000442739 958 ntBASIC15.61■□□□□ 0.09
PMPCBO75439 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.61■□□□□ 0.09
PMPCBO75439 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.61■□□□□ 0.09
PMPCBO75439 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.61■□□□□ 0.09
PMPCBO75439 MIR4745-201ENST00000577608 62 ntBASIC15.61■□□□□ 0.09
PMPCBO75439 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.61■□□□□ 0.09
PMPCBO75439 AL645728.2-202ENST00000641679 227 ntBASIC15.61■□□□□ 0.09
PMPCBO75439 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PMPCBO75439 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.61■□□□□ 0.09
PMPCBO75439 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.61■□□□□ 0.09
PMPCBO75439 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMPCBO75439 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 REXO1L4P-201ENST00000605109 1937 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 DRD5P1-201ENST00000456605 1438 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 DFFBP1-201ENST00000433250 979 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 FAM207CP-201ENST00000443486 507 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 AC104596.2-201ENST00000512793 793 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.6■□□□□ 0.09
PMPCBO75439 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.6■□□□□ 0.09
PMPCBO75439 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.6■□□□□ 0.09
PMPCBO75439 RRP7BP-205ENST00000566851 833 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 AL662799.1-202ENST00000614205 422 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.6■□□□□ 0.09
PMPCBO75439 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 ZBED1P1-201ENST00000502364 1930 ntBASIC15.6■□□□□ 0.09
PMPCBO75439 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PMPCBO75439 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMPCBO75439 REXO1L2P-201ENST00000425429 2069 ntBASIC15.59■□□□□ 0.09
PMPCBO75439 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.59■□□□□ 0.09
PMPCBO75439 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PMPCBO75439 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.59■□□□□ 0.09
PMPCBO75439 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PMPCBO75439 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PMPCBO75439 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms