Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.83□□□□□ -0.04
CPNE3O75131 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.82□□□□□ -0.04
CPNE3O75131 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.82□□□□□ -0.04
CPNE3O75131 AL355864.2-201ENST00000447420 863 ntBASIC14.82□□□□□ -0.04
CPNE3O75131 CROCCP4-201ENST00000457096 498 ntBASIC14.82□□□□□ -0.04
CPNE3O75131 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 AC017007.3-201ENST00000479865 435 ntBASIC14.82□□□□□ -0.04
CPNE3O75131 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.82□□□□□ -0.04
CPNE3O75131 AC104989.1-201ENST00000519711 778 ntBASIC14.82□□□□□ -0.04
CPNE3O75131 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.82□□□□□ -0.04
CPNE3O75131 COX11-210ENST00000639671 696 ntBASIC14.82□□□□□ -0.04
CPNE3O75131 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE3O75131 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CPNE3O75131 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE3O75131 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.81□□□□□ -0.04
CPNE3O75131 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CPNE3O75131 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 AC005229.1-201ENST00000392885 409 ntBASIC14.81□□□□□ -0.04
CPNE3O75131 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.81□□□□□ -0.04
CPNE3O75131 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CPNE3O75131 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.81□□□□□ -0.04
CPNE3O75131 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.81□□□□□ -0.04
CPNE3O75131 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.81□□□□□ -0.04
CPNE3O75131 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.81□□□□□ -0.04
CPNE3O75131 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CPNE3O75131 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.81□□□□□ -0.04
CPNE3O75131 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CPNE3O75131 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms